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Table 5 Genes down-regulated (≥ 3-fold vs LPS activation alone) by 10 μM PEO in macrophages

From: Dietary phenethylisothiocyanate attenuates bowel inflammation in mice

Gene name

abbreviation

Gene name full

Partial Gene Ontology term

http://www.geneontology.org

Fold change in response to LPS

CCL2*

Chemokine (C-C motif) ligand 2

Inflammatory response; Chemokine activity

-35.67

CSF2

Colony stimulating factor 2 (granulocyte- macrophage)

Immune response; Cytokine and chemokine mediated signaling pathway

-8.21

CSF3

Colony stimulating factor 3 (granulocyte)

Immune response; Cytokine activity

-53.69

CXCL10*

Chemokine (C-X-C motif) ligand 10

Inflammatory response; Chemokine activity

-30.05

FOS

FBJ osteosarcoma oncogene

DNA binding; Regulation of transcription

-10.90

GJA1

Gap junction membrane channel protein alpha 1

Cell-cell signaling

-19.25

IL10

Interleukin 10

Immune response; Cytokine activity

-4.95

IL1a

Interleukin 1 alpha

Inflammatory response; Cytokine activity

-291.36

IL1b

Interleukin 1 beta

Inflammatory response; Cytokine activity; Neutrophil chemotaxis; Positive regulation of IL-6 and chemokine biosynthesis

-32.83

IL6*

Interleukin 6

Signal transducer and cytokine activity

-14.39

MAPK3

Mitogen activated protein kinase 3

ATP binding; Transferase activity; Protein amino acid phosphorylation; Signal transduction; Inflammatory response; Regulation of cytokine biosynthesis; MAP kinase activity

-3.11

NFkB1

Nuclear factor of kappa light chain gene enhancer in B-cells 1, p105

DNA binding; Regulation of transcription

-21.51

NFkB2

Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100

DNA binding; Regulation of transcription

-5.72

NFkBia

Nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, alpha

Nucleus; Protein binding; Cytoplasm: Regulation of cell proliferation; Protein-nucleus import, translocation

-8.21

REL

Reticuloendotheliosis oncogene

DNA binding; Regulation of transcription

-5.76

RELb

Avian reticuloendotheliosis viral (v-rel) oncogene related B

Transcription factor activity; Intracellular; T-helper 1 type immune response

-3.78

RIPK2

Receptor (TNFRSF)-interacting serine-threonine kinase 2

Regulation of apoptosis

-5.72

SLC20a1*

Solute carrier family 20, member 1

Receptor activity; Phosphate transport

-6.81

STAT1*

Signal transducer and activator of transcription 1

DNA binding; Regulation of transcription

-4.81

TNFaip3*

Tumor necrosis factor, alpha-induced protein 3

Apoptosis; Zinc ion binding

-134.05

CD40*

CD40 antigen

Signal transduction; Immune response; Apoptosis

-46.74

  1. * Novel hits (genes) suppressed by PEITC/PEO (previously not reported)